Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIPGPAGEIPARHYRPSG-GGATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARDKARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNGFLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLA--ESLSGLAPALIAVAGFDPLRDEGESYAKALRAAG-TAVDLRYLGSL-THGFLNLFQLGGGSAAGTNELISALRAHLSRV |
4OB6 Chain:A ((65-307)) | ----------------------------------------------------------------------------------------------------------IEVKERTIQANGQSIKLQVVRPANVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPESHYPTAINQAYAATQWVAEHGK-EIGVDGKRLAVAGNAVGGNMAAVVAL----KAKEAGTPALRFQLLLHPVTDASFETASYKQFADGHFLTTGMMKWFWDNYTTDAKARE-QIYASPLRASSEQLKGLPPALVQTAEFDVLRDEGEAYARKLNAAGVTVTSVRYNGMIHDYGLLN-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115325 for 2087 contacts (-55.3/contact) +
2D Compatibility (PS) -25968 + (NN) -18870 + (LL) 8848
1D Compatibility (HY) -12800 + (ID) 4900
Total energy: -169015.0 ( -80.98 by residue)
QMean score : 0.491
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