Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -METLDLLAMRE------SYTRQRILLCFNGPISRSLIEEIGHALRNYLHAE-QAKPSEAMDVFAVYIE-MTQNIRHYANLKGYGEHEAAATVAIARNEDGHYVVSAGNLVERDDGQSLVRSIQAIANLDKAA-LKAAYKEQLRRPRDSGCASGAGLGLLDIARKSSEPLAASLKEQ-----PDGRAFFSLRAVI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYTEHIIVLF---ETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGWREMVDTLHMPWRDEGVYLITGGAGSLGLLFAKEIANRTGRSTIVLTGRSVLSEDKENELEALRSIGAEVVYREADVSDQHAVRHLLEEIKERYGTLNGIIHGAGSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDFPLDFFIFFSSVSGCLGNAGQADYAAANSFMDAFAEYRRSLAASKKRFGSTISFNWPLWEEGGMQVGAEDEKRMLKTTGMVPMPTDSGLKAFYQGIVSDKPQVFVMEGQLQKMKQKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44335 for 1139 contacts (-38.9/contact) +
2D Compatibility (PS) -18518 + (NN) -3560 + (LL) -120
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -73383.0 ( -64.43 by residue)
QMean score : 0.274
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