Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVLVTRE-ARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGE-QRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT
1VRG Chain:A ((38-259))------VEKQHRAGKLTAWERLELLLDPGTFVEIDK-FVEHRNTYFG-LDKVKLPRDGVITGVGEINGRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLALK-----MGIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLASGVVPQITVIAGP--CAGGAVYSPALTDFIVMVDQTARMFITGPNVIKAVTGEE-ISQED------LGGAMVHNQKSGNAHFLADNDEKAMSL-VRTLLSYLPSNNAEEPPVEDPDTSLETPEDILDILPDNPNKGYDVRDVIKRV


General information:
TITO was launched using:
RESULT:

Template: 1VRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107775 for 1878 contacts (-57.4/contact) +
2D Compatibility (PS) -24373 + (NN) -11572 + (LL) 792
1D Compatibility (HY) -8800 + (ID) 3050
Total energy: -154778.0 ( -82.42 by residue)
QMean score : 0.348

(partial model without unconserved sides chains):
PDB file : Tito_1VRG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VRG-query.scw
PDB file : Tito_Scwrl_1VRG.pdb: