Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSRLLSGIGAGPDSGSYTDLNRLNQLKVGKDRDGEANIRKVAQEFESLFLNEMLKSMRSANEALGDGNFMNSQTTKQYQDMYDQQLSVSLSKNAGGIGLADVLVRQLSKMKQGSRGNGENPFARVAENGAGRWPSNPSAQAGKALPMPEAGRDDSKLLNQRRLALPGKLAERMLAGIVPSASPAASQMQSLGQDSYLPAQSYPAASRRGFSTDGVDSQGSRRIAQPPLARGKSMFASADEFIATMLPMAQKAAERIGVDARYLVAQAALETGWGKSIIRQQDGGSSHNLFGIKTGSRWDGASARALTTEYEGGKAVKEIAAFRSYSSFEQSFHDYVSFLQGNDRYQNALDSAANPERFMQELQRAGYATDPQYARKVAQIARQMQTYQAVAAAGTPPLG |
4PW8 Chain:A ((26-367)) | -------IYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYE-LWFKQILWELDSVREIFQNGHVRD-----------ERNMLKVVSRMHRVSVILKLLVQQFSILETMT----ALDFNDFREYLS-----------------PASGFQS--------------LQFRLLENKIGVLQEENELLLKSEQEKTLLELVEAWLER----TPGLEPHGFN------------FWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQ--KEVLLS--------LFDEKRHEHLLSKGERRLS--YRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRML---------GSRY--KVFVDLFNLSTYL-IPRHWIPKMN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23819 for 2136 contacts (-11.2/contact) +
2D Compatibility (PS) -33450 + (NN) -13366 + (LL) 3724
1D Compatibility (HY) -12400 + (ID) 2550
Total energy: -81861.0 ( -38.32 by residue)
QMean score : 0.362
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