Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLFVCLGNICRSPTAEGVFRRKVEEAGLASRIHVDSAGTAGWHVGKAPDQRTRLAAQRRGYDLSALRGRQVGIEDFSRHDLILAMDLSNLADLETLRAGRGAAELDL---FLRRYGSERDEVPDPYYGGEEGFEQVLDLIEHACDRLLIEAKGRL
1U2Q Chain:A ((5-145))
LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDH-RAAQVGTEHLAA-DLLVALDRNHARLLRQL--GVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESA------------
General information:
TITO was launched using:
RESULT:
Template:
1U2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42840 for 1108 contacts (-38.7/contact) +
2D Compatibility (PS) -14762 + (NN) -3111 + (LL) 1516
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -72497.0 ( -65.43 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_1U2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U2Q-query.scw
PDB file :
Tito_Scwrl_1U2Q.pdb
: