Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFD-AGERRLLLLRGEIQLSTGHD-PRPLHVYSAEGRLRPVGTRFDVRQFAG--RTRVAVHEGAVQVENRAGQGLLLPSGRQLDFDRE--RLGAPQPLPVGSGAWTDGMLVAAGMRLDEFLAEVARYRPGRLGCD-PRIGGLRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE |
| 4M0N Chain:A ((20-231)) | LTEISVNH--------------------------------------------------------------------------------------------------------------GEHKQVTLPDGTVVHLNAGTVMRYPTEFTSDIRLVEMEGEAFFNVMRDEGKPFIVRTRQADVKVLGASFNVKAYQEDELMAVSVRTGKVEVDMP-ESVMRLLPNEQIIVNNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIYGEHDNKSLEAVLNAIQYSTGIRYRKEES-RIVLYKTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77842 for 1578 contacts (-49.3/contact) +
2D Compatibility (PS) -21666 + (NN) -6802 + (LL) 8808
1D Compatibility (HY) -11600 + (ID) 1800
Total energy: -110902.0 ( -70.28 by residue)
QMean score : 0.328
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