Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC
1BP2 Chain:A ((1-121))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDKK---
General information:
TITO was launched using:
RESULT:
Template:
1BP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53763 for 888 contacts (-60.5/contact) +
2D Compatibility (PS) -12651 + (NN) -6681 + (LL) 2536
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -91309.0 ( -102.83 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1BP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BP2-query.scw
PDB file :
Tito_Scwrl_1BP2.pdb
: