Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
1AN0 Chain:A ((2-136))
-QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV-IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
General information:
TITO was launched using:
RESULT:
Template:
1AN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47904 for 913 contacts (-52.5/contact) +
2D Compatibility (PS) -13908 + (NN) -7410 + (LL) 416
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -76056.0 ( -83.30 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1AN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AN0-query.scw
PDB file :
Tito_Scwrl_1AN0.pdb
: