Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VRSLNSIVAVCQNMGIGKDGNLPWPPLRNEYKYFQRMTSTSHVEGKQNAVIMGKKTWFSIPEKNRPLKDRINIVLSRELKEAPKGAHYLSKSLDDALALLDSPELKSKVDMVWIVGGTAVYKAAMEKPINHRLFVTRILHEFESDTFFPEIDYKDFKLLTEYPGVPADIQEEDGIQYKFEVYQKSVLAQ
1MVS Chain:A ((2-186))
VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKN----
General information:
TITO was launched using:
RESULT:
Template:
1MVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114542 for 1385 contacts (-82.7/contact) +
2D Compatibility (PS) -20467 + (NN) -11159 + (LL) 632
1D Compatibility (HY) -24000 + (ID) 6950
Total energy: -176486.0 ( -127.43 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_1MVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MVS-query.scw
PDB file :
Tito_Scwrl_1MVS.pdb
: