Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGRNTWKTSAFSFLVEQMWAPLWSRSMRPGRWCSQRSCAWQTSNNTLHPLWTVPVSVPGGTRQSPINIQWRDSVYDPQLKPLRVS-YEAA--SCLYIWNTGYLFQVEFDDATEASGISGGPLENHYRLKQFHFHWGAVNE-GGSEHTVDGHAYPAELHLVHWNSVKYQNYKEAVVGENGLAVIGVFLKLGAHHQTLQRLVDILPEIKHKDARAAMRPFDPSTLLPTC-WDYWTYAGSLTTPPLTESVTWIIQKEPVEVAPSQLSAFRTLLFSAL--GEEEKMMVNNYRPLQPLMNRKVWASFQATNEGTRS |
| 4HT2 Chain:A ((3-263)) | ---------------------------------------KWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD---MHIQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQ------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141656 for 2046 contacts (-69.2/contact) +
2D Compatibility (PS) -26663 + (NN) -5012 + (LL) 2788
1D Compatibility (HY) -17200 + (ID) 4200
Total energy: -191943.0 ( -93.81 by residue)
QMean score : 0.373
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