Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRDPRKPLAILRHVGLLCATGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVS-YDAA--SCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATD-EWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAH-HQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPAC-RDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRLDRTKMRS |
| 4LU3 Chain:A ((21-282)) | -------------------------HWTYEGPHGQDH--------WPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPST---LYL--GGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109811 for 2047 contacts (-53.6/contact) +
2D Compatibility (PS) -27360 + (NN) -12434 + (LL) 2220
1D Compatibility (HY) -17200 + (ID) 4500
Total energy: -169085.0 ( -82.60 by residue)
QMean score : 0.596
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