Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKATYKERAATHP-SPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN
3EWW Chain:A ((3-259))-MELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLD-VMKELITLAKCHEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPL---HRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS---MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIIS-AADRLEAAEMYRKAAWEAYLSRLG---


General information:
TITO was launched using:
RESULT:

Template: 3EWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164574 for 2213 contacts (-74.4/contact) +
2D Compatibility (PS) -27108 + (NN) -5636 + (LL) 332
1D Compatibility (HY) -27200 + (ID) 6450
Total energy: -230636.0 ( -104.22 by residue)
QMean score : 0.640

(partial model without unconserved sides chains):
PDB file : Tito_3EWW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EWW-query.scw
PDB file : Tito_Scwrl_3EWW.pdb: