Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
1TCO Chain:C ((1-107))
-GVQVETISPGDGRTFPKAGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1TCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55411 for 805 contacts (-68.8/contact) +
2D Compatibility (PS) -12008 + (NN) -7347 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5150
Total energy: -93308.0 ( -115.91 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_1TCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TCO-query.scw
PDB file :
Tito_Scwrl_1TCO.pdb
: