Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG-PGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
4GXL Chain:A ((19-153))
-QHMPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKS--KDIALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW
General information:
TITO was launched using:
RESULT:
Template:
4GXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66634 for 992 contacts (-67.2/contact) +
2D Compatibility (PS) -14053 + (NN) -5699 + (LL) 156
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -99480.0 ( -100.28 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_4GXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GXL-query.scw
PDB file :
Tito_Scwrl_4GXL.pdb
: