Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
4HY0 Chain:D ((22-119))
--------------TNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEEC-----
General information:
TITO was launched using:
RESULT:
Template:
4HY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22675 for 691 contacts (-32.8/contact) +
2D Compatibility (PS) -10670 + (NN) -6675 + (LL) 784
1D Compatibility (HY) -13200 + (ID) 4900
Total energy: -57336.0 ( -82.98 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_4HY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HY0-query.scw
PDB file :
Tito_Scwrl_4HY0.pdb
: