Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
3M94 Chain:A ((1-183))
----------------------------------MRHPLQCHWALWYLKADRSKDWEDCLKQVAVFDTVEDFWSLYNHIQAASGLTWGSDYYLFKEGIKPMWEDENNVKGGRWLVVVDKQKRAQLLDHYWLELLMAIIGEQFEDNGEYICGAVVNVRQKGDKVSLWTRDSLKDDVNLRIGQILKAKLEIPDTEPIRYEVHK-----TGSMVKPRIVI
General information:
TITO was launched using:
RESULT:
Template:
3M94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82563 for 1325 contacts (-62.3/contact) +
2D Compatibility (PS) -19175 + (NN) -12258 + (LL) 1524
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -135022.0 ( -101.90 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_3M94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M94-query.scw
PDB file :
Tito_Scwrl_3M94.pdb
: