Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
3QEN Chain:A ((38-279))
------------------TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQS------ELTMEQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
3QEN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118184 for 1857 contacts (-63.6/contact) +
2D Compatibility (PS) -24707 + (NN) -5927 + (LL) 708
1D Compatibility (HY) -34000 + (ID) 11600
Total energy: -193710.0 ( -104.31 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_3QEN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QEN-query.scw
PDB file :
Tito_Scwrl_3QEN.pdb
: