Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCSGNQTSQNQTASTDFTLTGL----------FAESKHAALLYTVTFLLFLMALTGNALLILLIHSEPRLHTPMYFFISQLALMDLMYLCVTVPKMLVGQVTGDDTISPSGCGIQMFFHLTLAGAEVFLLAAMAYDRYAAVCRPLHYPLLMNQRVCQLLVSACWVLGMVDGLLLTPITMSFPFCQSRKILSFFCETPALLKLSC-----SDVSLYKMLTYLCCILML--LTPIMVISSSYTLILHLIHRMNSA----AGRRKALATCSSHMIIVLLLFGASFYTYMLRSSYHTA-------EQDMMVSAFYTIFTPVLNPLIYSLRNKDVTRALRSMM---QSRMNQEK---------------- |
| 1U19 Chain:A ((4-349)) | --MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMALACAA---PPLVGW----SR-------YIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215602 for 2394 contacts (-90.1/contact) +
2D Compatibility (PS) -30516 + (NN) -7167 + (LL) 1664
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -256421.0 ( -107.11 by residue)
QMean score : 0.250
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