Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTVNHSGTSHTVFHLLGIPGLQD-QHMWISIPF--FISY----VTALLGNSLLIFIILTKRSLHEPMYLFLC-----MLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESG-----ILLVMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPHT----FCEHI--GLAKYACNDIRINIWYGFSILMSTVVL------DVVLIFISYMLILHAVFHMPSPDACHKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPIIYGIKTKQIQEQVVQFLFIKQK |
4R6Y Chain:A ((1-317)) | --------SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNTDTASAIP--DANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKN------KLQYSTP-GQAADGTAVMLQAFHSFGSKDAGFAYLGKLQ--ANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGL--VQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDV----TPSDEHYKAATAALEGVQSWQPN-WDDVAVSLSADISRWHKVTES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -360421 for 2364 contacts (-152.5/contact) +
2D Compatibility (PS) -30024 + (NN) -1056 + (LL) 2016
1D Compatibility (HY) 0 + (ID) 2650
Total energy: -392135.0 ( -165.88 by residue)
QMean score : 0.179
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