Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLDSFFSF----------LLKSLIMALSNSSWRLPQPSFFLVGIPGLEESQHWIALPLGILYLLALVGNVTILFIIWMDPSLHQSMYLFLSM-LAAIDL-VVASSTA-PKALAVLLV-RAQEIGYTVCLIQMFFTHAFSSMESGVLVAMALDRYVAICHPLHHSTILHPGVIGHIGMVVLVRGLLLLIPFLILLRKLIFCQATIIGHAYCEHMAVVKLACSETTVNRAYGLTVALLVVGLDVLAIGVSYAHILQ-AVLKVPGNEARLKAFS----------TCGSHVC-VILVFYIPGMFSFLTHRFGHHVPHHVHVLLAILYRLVPPALNPLVYRVKTQKIHQ-- |
| 1L8Q Chain:A ((2-324)) | DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNP-IFIYGSVGT-----------GKTHLLQAAGNEAKK---RGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVS-----------DRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1L8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -313494 for 2145 contacts (-146.2/contact) +
2D Compatibility (PS) -30651 + (NN) -12579 + (LL) 1976
1D Compatibility (HY) 4800 + (ID) 2000
Total energy: -351948.0 ( -164.08 by residue)
QMean score : 0.202
|
|
|