Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MVLASGNSSSH--PVSFILLGIPGLESFQLWIAFPFCATYAVAV----VGNITLLHVIRIDHTLHEPMYLFLAMLAITDLVLSSSTQPKMLAIFWFHAHEIQYHACLIQVFFIHAFSSVESGVLMAMALDCYVAICFPLRHSSILTPSVVIKLGTIVMLRGLLWVSPFCFMVSRMPFCQHQAIPQSYCEHMA-------VLKLVCADTSISRGNGLFVAFSVAGFDMIVI------GMSYVMILRAVLQLPSGEARLKAFSTRSSHICVILALY------IPALFSFLTYRFGHDVP----------------RVVHILFANLYLLIPPMLN---PIIYGVRTKQ--IGDRVI-----------QGCCGNIP |
| 2WZP Chain:R ((1-375)) | MLEANVYDNFNPNYYNISDFSMPNGKKEKRGLPIPKARCQVINYELWETGYLYTSSATLTVSVEVGDIVQILFPEVVPIEEALGKKKKLNLDMVYLVTDV-DESNKATLKNYFWAMIESLDVP---------NAITKTTNFAIIDYLID--PNKNNLMSYGYFFNSSIFAGKATIN--RKAETSS--AHDVAKRIFSKVQFQPTTTIQHAPSETDPRNLLFINFASRNWNRKRITTRVDIKQSVTMDTETIVERSAYNFAVVFVKNKATDDYTDPPKMYIAKNNGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISPSTIVTRLIFNQNELLPLYVNDLVDIWYEGKLYSGYIADRVKTEFNDRLIFVESGDKPNVI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -248965 for 2082 contacts (-119.6/contact) +
2D Compatibility (PS) -30928 + (NN) 7388 + (LL) 2060
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -279095.0 ( -134.05 by residue)
QMean score : 0.101
|
|
|