Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKNNLTRVTEFILMG---------------FMDHPKLEIPLFLVFLSFYLVTLLGNVGMIMLIQVDVKLYTPMYFFLSHLSLLDACYTSVITPQILATLATGKTVISYGHCAAQFFLFTICAGTECFLLAVMAYDRYAAIRNPLLYTVAMNPRLCWSLVVGAYVCGVSGAILRTTCTFTLSFCKDNQINFFFCD-LPPLLKLAC-------SDTANIEIVIIFFGNFVILANASVILISYLLIIKTILKVKS----SGGRAKTFSTCASHITAVALFFGAL------IFMYLQSGSGKSL-EEDKVVSVFYTVVIPMLNPLIYSLRNKDVKDAFRKV----------------ARRLQVSLSM-- |
1U19 Chain:A ((4-349)) | --MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM----------------SNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220143 for 2270 contacts (-97.0/contact) +
2D Compatibility (PS) -29346 + (NN) 4542 + (LL) 2016
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -247881.0 ( -109.20 by residue)
QMean score : 0.150
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