Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----M-QAALTAFFVLLFSLLSLLGIAANGFIVLVLGREWLRYGRLLPLDMILISLGASRFCL-QLVGTVHNFYYSAQKVEYS-GGLGRQFF--------HLHWHF------------LNSATFWFCSWL-SVLFCVKIA-------NITHSTFLWLKWRFPGWVPWLLLGSVLISFIITLLFFWV-NYPVY---------------------QEFLIRKFSGNMTYKWNTRIE-------------------TYYFPSLKLVIWSIPF--SVFLV-SIMLLINSLRRH----------------TQRMQHNGHSLQDPSTQ------AHTRALKSLISFLILYALSF-LSLII-DAAKFISM-------QNDFYWPWQIAVYLCISVHPFIL-IFSNL--KLRSVF-S----QLLLLARGFWVA |
4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFLYFWE-----GAEPNSGLAP---ERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIV-YTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYP---QRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -316691 for 2156 contacts (-146.9/contact) +
2D Compatibility (PS) -29792 + (NN) -2829 + (LL) 1324
1D Compatibility (HY) -4000 + (ID) 2850
Total energy: -354838.0 ( -164.58 by residue)
QMean score : 0.205
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