Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MPSAIEAI----YIILIAG----ELTIGIWGNGFIV-------LVNCIDWLKRRDI-------------------------SLIDIILISLAISRI-CLLCVISLDGFFM------LLFPGTYGNSVLVSIVNV-------VWTFANNSSLWFTSCL---SIFYLLKIANISHPFFFWLKLKINKVMLAILLGSFLISLIISVPKNDDMWYHLFKVS---HEENITWKFKVSKIPGTFKQL--TLNLGVMVPFILCLISFFLLLFSLVRHTKQIRL-HATGFRDPSTEAHMRAIKAVI----IFLL----LLIVYYPVFLVMTSS-----ALIPQGKLVLMIGDIVTV-----IFPSSHSFILIMGNSKLREA-------FLKMLRFVKCF-LRRRKPFVP------------------ |
| 4Q6O Chain:A ((21-437)) | MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDT-EMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLP-----KMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -330928 for 2176 contacts (-152.1/contact) +
2D Compatibility (PS) -31642 + (NN) 7530 + (LL) 672
1D Compatibility (HY) -8800 + (ID) 3450
Total energy: -366618.0 ( -168.48 by residue)
QMean score : 0.125
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