Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IACPQVNMYLAQCLPYLKA---GG---NP------------SPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIP----GIN-----DDFAKQLPAKCGVNIGVPFSKTVDCNSIN
1W2Q Chain:A ((22-114))
------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME------NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36795 for 393 contacts (-93.6/contact) +
2D Compatibility (PS) -6920 + (NN) -2922 + (LL) 1496
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -48141.0 ( -122.50 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: