Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-C----NINANHLEKCRPAVI----GDNPPSPI----KECCELLQAANLKCIC-----------------RFKSVLPVL-AVYPSKVQAL------LSKCGLTTIP--PACQALRN
1BEA Chain:? ((5-120))
SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27640 for 411 contacts (-67.3/contact) +
2D Compatibility (PS) -8185 + (NN) -2666 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -44391.0 ( -108.01 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: