Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLPSLQG |
M041 Chain:A ((6-133)) | AGKCGKTPAEKVALKLAPCAKAAQDPGARPPAACCAAVRDIGTHQSHACLCAVLLSSTVRRSGVKPEVAITIPKRCKLANRPVGYKCGAYTLPSLQG |
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General information:
TITO was launched using:
| RESULT:
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Template: M041.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7073 for 691 contacts (10.2/contact) +
2D Compatibility (PS) -9149 + (NN) 2162 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 500
Total energy: 3186.0 ( 4.61 by residue)
QMean score : 0.031
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