Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP
M041 Chain:A ((3-117))
AEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP
General information:
TITO was launched using:
RESULT:
Template:
M041.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11207 for 699 contacts (-16.0/contact) +
2D Compatibility (PS) -9430 + (NN) -2996 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 350
Total energy: -21983.0 ( -31.45 by residue)
QMean score : -0.035
(partial model without unconserved sides chains):
PDB file :
Tito_M041.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M041-query.scw
PDB file :
Tito_Scwrl_M041.pdb
: