Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VPGQGTCQGDIEGLMKECAVYVQRPGPKVNPSEACCRVVKRSDIPCACGRITASVQQMIDMDKVVHVTAFCGKPLAHGTKCGSYVVP |
M041 Chain:A ((3-138)) | VPGQGTCQGDIEGLMKECAVYVQRPGPKVNPSEACCRVVKRSDIPCACGRITASVQQMIDMDKVVHVTAFCGKPLAHGTKCGSYVVP |
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General information:
TITO was launched using:
| RESULT:
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Template: M041.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1542 for 601 contacts (2.6/contact) +
2D Compatibility (PS) -8247 + (NN) 740 + (LL) 0
1D Compatibility (HY) 6000 + (ID) 300
Total energy: -265.0 ( -0.44 by residue)
QMean score : 0.064
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