Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APAGTTCEQLESVARSCTGYLK--RSLIFLNDACCDGAESVYDALTTDAAVDLGFVCRCLRGF---VISESLRPYLYRVANLPRLCRFKDRGPIPYNNSTIHDCRFSGTTRHSL---------
2HFT Chain:? ((107-218))
NLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFL----SLRDVFGK----DLIYTLYYWKSSGKKTAKTNTNEFLIDV----------DKG-ENYCFS-VQAVIPSRTVNRKSTDSPVECMG
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42176 for 520 contacts (-81.1/contact) +
2D Compatibility (PS) -9365 + (NN) -11 + (LL) 1044
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -55808.0 ( -107.32 by residue)
QMean score : 0.121
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: