Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVVSSLSQCASYLRNGGAVPPACCSGVKSLNSAARTTPDRQTVCGCLKRASGGVNASNAASLPGKCGVNIPYKISPSTDCSKVQ
M041 Chain:A ((1-96))
AITCGQVVSSLSQCASYLRNGGAVPPACCSGVKSLNSAARTTPDRQTVCGCLKRASGGVNASNAASLPGKCGVNIPYKISPSTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
M041.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47865 for 625 contacts (-76.6/contact) +
2D Compatibility (PS) -8967 + (NN) -865 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 4450
Total energy: -72547.0 ( -116.08 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_M041.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M041-query.scw
PDB file :
Tito_Scwrl_M041.pdb
: