Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DFSALAPCDVTQLTPCASAFAGKASPTAACCAKLMSHGPVCLCRYKDDASLKRLVDARHKRRVFTACKVPVPSC
M041 Chain:A ((4-91))
DFSALAPCDVTQLTPCASAFAGKASPTAACCAKLMSHGPVCLCRYKDDASLKRLVDARHKRRVFTACKVPVPSC
General information:
TITO was launched using:
RESULT:
Template:
M041.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8038 for 467 contacts (-17.2/contact) +
2D Compatibility (PS) -6874 + (NN) -651 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 250
Total energy: -14213.0 ( -30.43 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_M041.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M041-query.scw
PDB file :
Tito_Scwrl_M041.pdb
: