Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----GGVVEICN---VSKDDLMPCKPAV-----TQPPAQPV-------QACCSVLSTANLTCFCEFGNNYPSLLRMFGIDPDLAKA----LPGECKLNSPPGC--
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNE-PMWIRMRDQVMSMAHNLPIECNL-MSQPCQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34052 for 484 contacts (-70.4/contact) +
2D Compatibility (PS) -7922 + (NN) -4088 + (LL) 96
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -48916.0 ( -101.07 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: