Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHAGNVNPTLVAELPKKCGISFNMPPIDKNYDCNT
M041 Chain:A ((2-96))
APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNAFIHAGNVNPTLVAELPKKCGISFNMPPIDKNYDCNT
General information:
TITO was launched using:
RESULT:
Template:
M041.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25673 for 705 contacts (36.4/contact) +
2D Compatibility (PS) -9550 + (NN) -1782 + (LL) 0
1D Compatibility (HY) 6800 + (ID) 400
Total energy: 20741.0 ( 29.42 by residue)
QMean score : -0.018
(partial model without unconserved sides chains):
PDB file :
Tito_M041.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M041-query.scw
PDB file :
Tito_Scwrl_M041.pdb
: