Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGDVVRTLTPCISYVRY---GGP----LPDNCCNGVKTLYGEAQTSADRQNVCKCIKSAVNGFSY-----SN----FNLGLAAGLPGKCGLHLPYTISPSTDCNKVQ
1HSS Chain:A ((15-104))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV-------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53044 for 408 contacts (-130.0/contact) +
2D Compatibility (PS) -6501 + (NN) -982 + (LL) 1516
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -64811.0 ( -158.85 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: