Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------AITCSQVSSYLAPCIPYLRGSGGAVPSNCCSGIKNLNGAAQTSQDRKAACGCIKNAAGSISGIN---------------YALASQM---PSKCGVSIPYQISPNID----CNSVN-------
1B0A Chain:A ((2-122))
AAKIIDGKTI-AQQVRSEVAQKVQARIAAGLRAP-----GLAVV--LVGSNPASQIYVASKRKACEEV-GFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG
General information:
TITO was launched using:
RESULT:
Template:
1B0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26109 for 454 contacts (-57.5/contact) +
2D Compatibility (PS) -8847 + (NN) -3105 + (LL) -252
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -43013.0 ( -94.74 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1B0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0A-query.scw
PDB file :
Tito_Scwrl_1B0A.pdb
: