Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YGPCGKHDIEKEAEKLAPCTKAAQYL------EA---PVSKRCCTVMEKKLKNPDCLCAIMFSH---TARSA------------G----V-N-PEVAVTIPKRCNIPVRPVGHKCGAFPLV
1B1U Chain:A ((16-114))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFC------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38089 for 450 contacts (-84.6/contact) +
2D Compatibility (PS) -7103 + (NN) -4363 + (LL) 992
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -50863.0 ( -113.03 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: