Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDRTALKLAPCAAATQNPRAAVPPSCCAQVRGIGRNPKCLCAVMLSNTARQAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
M041 Chain:A ((1-123))
AGECGRVPVDRTALKLAPCAAATQNPRAAVPPSCCAQVRGIGRNPKCLCAVMLSNTARQAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
General information:
TITO was launched using:
RESULT:
Template:
M041.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48233 for 691 contacts (-69.8/contact) +
2D Compatibility (PS) -9505 + (NN) -7993 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 4550
Total energy: -81481.0 ( -117.92 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_M041.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M041-query.scw
PDB file :
Tito_Scwrl_M041.pdb
: