Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AGECGATPA---DQMALKLAPCLTAAKDPEASPSKSCCAAVVDIWGHSTECLCAV---LLSNTLKRFGVKVE--------VAITIPKRCN--IANRPIGYKCG-DYTLPSLQD-
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEA---VLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39903 for 570 contacts (-70.0/contact) +
2D Compatibility (PS) -9429 + (NN) -6817 + (LL) 248
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -56901.0 ( -99.83 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: