Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYTRLMIQVHSYVPFCAYTYDYFSYCLDFLTGYYYKPGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTPPMLADKIQQLPLLCNTHLSFPISSSMDCSTV
M041 Chain:A ((13-106))
------------VPFCAYTYDYFSYCLDFLTGYYYKPGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTPPMLADKIQQLPLLCNTHLSFPISSSMDCSTV
General information:
TITO was launched using:
RESULT:
Template:
M041.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81956 for 689 contacts (-118.9/contact) +
2D Compatibility (PS) -9799 + (NN) -4587 + (LL) 1176
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -117466.0 ( -170.49 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_M041.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M041-query.scw
PDB file :
Tito_Scwrl_M041.pdb
: