Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAERENVVVVHSCAVTNEAERQVKQKIRKIYKNDPNKEIIVVGCAVQLDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARGNNRSVPINNIIEQIKIFVA----------NGYQEVVFTG-VDITDFGTDLFGKPSLGLMVRRVLKDVPEL----KRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKR---RHSREQVIEFCHKVKSL----RSNIAYGADIIAGFPTETDEMFQDTVNLLEETNTVYLHAFPYSKRKNTPAARMPQVPENVRKERVKNLRKINKAMMSNFYQSLIGTKQSVLVEQNNIGRAENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP |
| 3RFA Chain:A ((113-318)) | ----------------------------------------------------------------------------------------------------------------------------DRATLCVSSQVGCALECKFCSTAQQG-FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNN------VVPAMEIMLDD-FGFGLSKRRVTLS-TSGVVPALDKLGDM-----IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDH-VNDGTEHAHQLAELLKDTPCK-INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76572 for 1368 contacts (-56.0/contact) +
2D Compatibility (PS) -19653 + (NN) -5495 + (LL) 13792
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -97178.0 ( -71.04 by residue)
QMean score : 0.406
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