Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MAHIPV-LLKEMLLQLSPQNGGIYVDATFGAGGYSKAILES-ADCKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVF-DIGVSSMQLDDGDRGFSFLHDGPLD-M-RMDNSSHTNASTFVNALREEEIANTIYNYGGE-RHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
| 1M6Y Chain:A ((4-296)) | RKYSQRHIPVMV-REVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEK--------------------------------------VDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESE--VTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENRPLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101841 for 2377 contacts (-42.8/contact) +
2D Compatibility (PS) -30632 + (NN) -10150 + (LL) 2532
1D Compatibility (HY) -20400 + (ID) 5550
Total energy: -166041.0 ( -69.85 by residue)
QMean score : 0.493
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