Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQG-I--------VLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAI--------------------RPL-----------------KDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPV----TEPEGSMVVDIGGGTTEVAIISLGG--IVY---SRSARVGGDIMDEAIRSYIRENHKLL-------------IGETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTK-LPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 3I33 Chain:A ((23-401)) | ---------------------MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD---TE--RLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQ------ASIEID--SLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKG-Q-I-QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148511 for 2613 contacts (-56.8/contact) +
2D Compatibility (PS) -33757 + (NN) -14356 + (LL) 2180
1D Compatibility (HY) -6000 + (ID) 3550
Total energy: -203994.0 ( -78.07 by residue)
QMean score : 0.499
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