Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENLAYKLIKVTEAAALAAYKLV--GLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAH-YKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAAIVSLINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIFDTHQSKERAKILNIDDLEKIYSIKDMVKGESVFI-ATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
1DK4 Chain:A ((1-252)) | -----MKWDEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKSLNVNIVSEELGVIDNSSEWTVVIDPIDGSFNFINGIPFFAFCFGVFK------------------NNEPYYGLTYE--FLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNIVISYYPS--------KKIDLEKLRNKVKRVR---------IFGAFGLEMCYVAKGTLDAVF-----------------DVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNATDRLNIIVANSKEMLDIILDLL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59427 for 2179 contacts (-27.3/contact) +
2D Compatibility (PS) -26486 + (NN) -3650 + (LL) 4468
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -91195.0 ( -41.85 by residue)
QMean score : 0.193
|
|
|