Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVVLSGYGL--NCEKETAFAFVECGRKLGVNNIEVRIVHINEI-I-------------KNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFSNLALIR-----------NDIG----------------NYQCR-WIKVKVSPQSSSVWLQDL-NELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGR-VLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
| 2V4U Chain:A ((299-533)) | CSIALVGKYTKLRDCYASVFKALEHSALAI---NHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIRGTL------------GKLQAISWARTKKIPFLGV-LGMQLAVIEFARN----CLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTE--NSILRKLYGDVPFIEERHRHR-FEVNPNLIKQFEQNDLSFVGQDV--------------DG--DRMEIIELANHPYFVGVQFHPEFSSRP-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90512 for 1417 contacts (-63.9/contact) +
2D Compatibility (PS) -20089 + (NN) -5195 + (LL) 3844
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -119752.0 ( -84.51 by residue)
QMean score : 0.311
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