Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRTQYNNLVSSYARALFLVSENKLSVVRKEVEFLLAFFKSQHDVFIYLSHPMISFARKKEVIFSVNEHLSESLVKFIAVIFANKRSNLLISVLEKFLTLVRESENEL-------EITIKSAETLSESNIKIITESLSFLGKIVRVDNAVDPSILGGFIVKY-GFNLIDASLKSY--LDRLVDLSKVEILKTRNFI |
| 1ZYO Chain:A ((4-189)) | ----------SFYSPVKAGDEPASLVAIKSGPTTIGFGCRTKIEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKMLDFAIVRVPTHVWSKLGVKSTPLVCPSSKDVITCYGGSSSDCLMSGVGSSSTSEFTWKLTHTCPTAAGWSGTPLYSSRGVVGMHVGFEEIGKLNRGVNMFYVANYLLRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62308 for 1444 contacts (-43.1/contact) +
2D Compatibility (PS) -17668 + (NN) 7730 + (LL) 1180
1D Compatibility (HY) -400 + (ID) 900
Total energy: -72366.0 ( -50.11 by residue)
QMean score : 0.119
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