Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNQTVRGTKDLLFDEWYRFKYIQQIANRISSLYGFLPAQTPIFEYTEVFMKTLGDGSDIINKEMYTFYDKGGKSITLRPEFTAAIVRLLVEKK----LQIPIKLFSTGPAFRYERPQKGRQRQFHQINFEVFGVENPKADIELISLAHHLLTEFNISKNVRLEINSLGDSETIAKYKEVLIPYFKKFQNDLSEDSQNRLTKNPLRILDSKDEKDKLIISDAPKISDYYTRESSDFFEQILNGLTALNIPCTVNSKLVRGLDYYCHTVFEFVIEDF---GAQGAVFAGGRYDNLVSSVGGKYTPAIGFAGGIERIMELINYSMK-----GDRPICLVPIGREAEEHALTLANELRRNGLYVIYEYNG-ALKNRMKKASQANAKAALIFGNEELGSKTLKIKNMDTGEEKIIAYGNIMENIHQTLLV |
| 1QE0 Chain:A ((1-419)) | -MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFAR-----------EMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRY-------YRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLK-HLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTDPMRIL------------TAPRITDFLNEESKAYYEQVKAYLDDLGIPYTEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFKK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222047 for 2835 contacts (-78.3/contact) +
2D Compatibility (PS) -40708 + (NN) -10610 + (LL) 1664
1D Compatibility (HY) -29600 + (ID) 7250
Total energy: -308551.0 ( -108.84 by residue)
QMean score : 0.550
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