Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQE---EFYRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSEEIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIFVWQESRQLPLFDN-FKIYTIL-PKREDVYRKINSRFVTMIESGAVDEVKKLLNMN-LAPHLPAMRAHGVPEIIKYLKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3FOZ Chain:A ((8-299)) | SLPKAIFLMGPTASGKTALAIELRK-ILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGD-ALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGV-HWLDSEKPEQARDEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141092 for 2203 contacts (-64.0/contact) +
2D Compatibility (PS) -30943 + (NN) -13684 + (LL) -104
1D Compatibility (HY) -14000 + (ID) 4200
Total energy: -204023.0 ( -92.61 by residue)
QMean score : 0.553
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