Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
1C94 Chain:A ((2-38))
-----------------GGREGVLKKLRAVENEL---HYNKSLLEEVKDELQKMRQL----------------
General information:
TITO was launched using:
RESULT:
Template:
1C94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4813 for 135 contacts (35.7/contact) +
2D Compatibility (PS) -4272 + (NN) -5264 + (LL) 2828
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -4095.0 ( -30.33 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1C94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C94-query.scw
PDB file :
Tito_Scwrl_1C94.pdb
: