Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
1O25 Chain:B ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDM---DEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEVQV-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1O25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149989 for 1489 contacts (-100.7/contact) +
2D Compatibility (PS) -20926 + (NN) -1193 + (LL) 4832
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -191276.0 ( -128.46 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_1O25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O25-query.scw
PDB file :
Tito_Scwrl_1O25.pdb
: